henry copeland @hc

having fun with people and pixels, via racery, pullquote, twiangulate, improv, running

Recent quotes:

Florida Agency Investigated Nikolas Cruz After Violent Social Media Posts - The New York Times

Agency investigators identified Mr. Cruz, who had turned 18 a few days earlier, as a “vulnerable adult due to mental illness.” In addition to depression, Mr. Cruz had autism and attention-deficit hyperactivity disorder, the report said. He was regularly taking medication for the A.D.H.D. It was unclear whether he was taking anything for the depression, according to the report.

Stanford researcher: Hallucinatory 'voices' shaped by local culture

The striking difference was that while many of the African and Indian subjects registered predominantly positive experiences with their voices, not one American did. Rather, the U.S. subjects were more likely to report experiences as violent and hateful – and evidence of a sick condition. The Americans experienced voices as bombardment and as symptoms of a brain disease caused by genes or trauma. One participant described the voices as “like torturing people, to take their eye out with a fork, or cut someone’s head and drink their blood, really nasty stuff.” Other Americans (five of them) even spoke of their voices as a call to battle or war – “‘the warfare of everyone just yelling.'” Moreover, the Americans mostly did not report that they knew who spoke to them and they seemed to have 
less personal relationships with their voices, according to Luhrmann. Among the Indians in Chennai, more than half (11) heard voices of kin or family members commanding them to do tasks. “They talk as if elder people advising younger people,” one subject said. That contrasts to the Americans, only two of whom heard family members. Also, the Indians heard fewer threatening voices than the Americans – several heard the voices as playful, as manifesting spirits or magic, and even as entertaining. Finally, not as many of them described the voices in terms of a medical or psychiatric problem, as all of the Americans did.

The link between circadian rhythms and aging: Gene associated with longevity also regulates the body's circadian clock -- ScienceDaily

Last year, Guarente found that a robust circadian period correlated with longer lifespan in mice. That got him wondering what role SIRT1, which has been shown to prolong lifespan in many animals, might play in that phenomenon. SIRT1, which Guarente first linked with aging more than 15 years ago, is a master regulator of cell responses to stress, coordinating a variety of hormone networks, proteins and genes to help keep cells alive and healthy.

Visualizing assemblies of the proteins that direct cyanobacterial circadian rhythms

KaiB, though, flips between two different shapes, and is only active when it's in an unstable shape—a situation that until now made crystallization impossible. "We mutated KaiB so that it stayed in its active shape, and when we added KaiA and KaiC they arranged themselves around it as they do at night," LiWang said. "We found the secret sauce that allows us to figure out how the springs and gears go together." They were amazed that they obtained crystals within a day of combining the proteins. They also solved an NMR structure of a complex between the active form of KaiB and the domain of a protein (CikA) that transmits signals to regulate gene expression in cyanobacteria. "It's really remarkable that the cyanobacterial clock is so dependent on this rare state of KaiB," Partch said. "The mechanistic information we're getting out of these structures is allowing us to piece together how the clock manages to keep 24-hour time. We're now looking for similar clues in other circadian timekeeping systems, including our own."

Sleep Shrinks the Brain--and That's a Good Thing - Scientific American

Cirelli said that one interesting finding was that this pruning occurred in about 80 percent of the synapses but spared the largest ones. These larger synapses may be associated with the most stable and important memories, connections the brain does not want to lose, the researchers speculated. Yet, the way in which the brain decides what synaptic connections to prune is another mystery to explore, Cirelli said. "It is critical to have pruning back at night, so that the huge amount of information encoded by temporary synapses during the day won't overwhelm the brain," said Foster. "Pruning ensures that only the most important information is retained."

Cells communicate in a dynamic code: A critically important intercellular communication system is found to encode and transmit more messages than previously thought. -- ScienceDaily

The team studied two chemically similar Notch ligands, dubbed Delta1 and Delta4. They discovered that despite the ligands' similarity the two activated the same receptor with strikingly different temporal patterns. Delta1 ligands activated clusters of receptors simultaneously, sending a sudden burst of transcription factors down to the nucleus all at once, like a smoke signal consisting of a few giant puffs. On the other hand, Delta4 ligands activated individual receptors in a sustained manner, sending a constant trickle of single transcription factors to the nucleus, like a steady stream of smoke.

Link between hallucinations and dopamine not such a mystery, finds study -- ScienceDaily

"Our brain uses prior experiences to generate sensory expectations that help fill in the gaps when sounds or images are distorted or unclear," said Guillermo Horga, MD, PhD, assistant professor of clinical psychiatry at CUIMC and a research psychiatrist at NYSPI. "In individuals with schizophrenia, this process appears to be altered, leading to extreme perceptual distortions, such as hearing voices that are not there. Furthermore, while such hallucinations are often successfully treated by antipsychotic drugs that block the neurotransmitter dopamine in a brain structure known as the striatum, the reason for this has been a mystery since this neurotransmitter and brain region are not typically associated with sensory processing." The researchers designed an experiment that induces an auditory illusion in both healthy participants and participants with schizophrenia. They examined how building up or breaking down sensory expectations can modify the strength of this illusion. They also measured dopamine release before and after administering a drug that stimulates the release of dopamine. Patients with hallucinations tended to perceive sounds in a way that was more similar to what they had been cued to expect, even when sensory expectations were less reliable and illusions weakened in healthy participants. This tendency to inflexibly hear what was expected was worsened after giving a dopamine-releasing drug, and more pronounced in participants with elevated dopamine release, and more apparent in participants with a smaller dorsal anterior cingulate (a brain region previously shown to track reliability of environmental cues).

First multiplex test for tick-borne diseases: Promising to revolutionize diagnosis, a single blood test can now accurately detect if someone is infected with Lyme and/or one of seven other tick-borne diseases -- ScienceDaily

The TBD Serochip can simultaneously test for the presence of antibodies in blood to more than 170,000 individual protein fragments. Version 1.0 can identify exposure to eight tick-borne pathogens present in the U.S., including Anaplasma phagocytophilum (agent of human granulocytic anaplasmosis), Babesia microti (babesiosis), Borrelia burgdorferi (Lyme disease), Borrelia miyamotoi, Ehrlichia chaffeensis (human monocytic ehrlichiosis), Rickettsia rickettsii (Rocky Mountain spotted fever), Heartland virus and Powassan virus. The researchers also included Long Island tick rhabdovirus, a novel virus they recently discovered in Amblyomma americanum ticks. As new tick-borne infectious agents are discovered, the TBD-Serochip will be modified to target them -- a process the researchers say can be done in less than four weeks.

Why do healthy children die from the flu? Study offers new insights -- ScienceDaily

The study examined specific immune pathways known to be activated during flu infections in both humans and mice, which makes the findings relevant to children. Coates and colleagues focused on the initial immune response to the flu, using healthy adult and young mice who have not had previous exposures to the virus. They discovered that in the young, more immune cells called monocytes were recruited to the lungs, and that the gene expression profiles of these cells had more inflammatory features, causing greater inflammation and more severe lung injury. "Our findings provide new targets for developing effective medicines to treat the flu in children," says Coates. "We can seek ways to prevent monocytes from coming to the lungs, or we can target monocyte behavior in the lungs to reduce dangerous inflammation."

OCD treatment could someday start with a brain scan -- ScienceDaily

Using a functional MRI machine, or fMRI, the researchers scanned the brains of 42 people with OCD, ages 18 to 60, before and after four weeks of intensive, daily cognitive behavioral therapy. Researchers specifically analyzed how different areas of the brain activate in sync with each other -- a property called functional connectivity -- during a period of rest. Functional MRI does this by measuring blood flow in the brain, which correlates with neurons' activity levels. In addition, the scientists assessed the severity of participants' OCD symptoms before and after the treatment, using a scaled system in which a lower score indicates less severe or less frequent symptoms.

5 Hours of Glenn Gould Outtakes. Why? Listen and Find Out. - The New York Times

In a 1966 article, “The Prospects of Recording,” he fantasized about a future when listeners would be granted tape-edit options and could patch together their preferred versions of, say, Beethoven’s Fifth Symphony, from recordings by different conductors.

5 Hours of Glenn Gould Outtakes. Why? Listen and Find Out. - The New York Times

The master pianist Artur Schnabel, for one, initially resisted entreaties to make records. The nature of a performance, he wrote in a memoir, “is to happen but once, to be absolutely ephemeral and unrepeatable.”

Running helps brain stave off effects of chronic stress: Exercise protects vital memory and learning functions -- ScienceDaily

"Exercise is a simple and cost-effective way to eliminate the negative impacts on memory of chronic stress," said study lead author Jeff Edwards, associate professor of physiology and developmental biology at BYU. Inside the hippocampus, memory formation and recall occur optimally when the synapses or connections between neurons are strengthened over time. That process of synaptic strengthening is called long-term potentiation (LTP). Chronic or prolonged stress weakens the synapses, which decreases LTP and ultimately impacts memory. Edwards' study found that when exercise co-occurs with stress, LTP levels are not decreased, but remain normal.

Memories and recursion to the mean

The behavioral data revealed that as the rat awaited the second stimulus of the trial, the memory of the first stimulus shifted towards the mean of preceding stimuli. The experiment thus confirmed the sliding of memory towards the expected value, a phenomenon that earlier studies have termed 'contraction bias.'

Start small

If the science is compelling and if an incremental approach is good enough for the top athletes in the world, then why do so many people still fall prey to a suboptimal cycle of big, in-over-your-head workouts followed by extended time off due to injury and fatigue? Dixon believes there are two primary reasons: a lack of self-confidence, and a lack of understanding the training process.

Timing is everything, to our genes -- ScienceDaily

Using RNA sequencing, the research team tracked gene expression in dozens of different non-human primate tissues every 2 hours for 24 hours. The team found that each tissue contained genes that were expressed at different levels based on the time of day. However, the number of these "rhythmic" genes varied by tissue type, from around 200 in pineal, mesenteric lymph nodes, bone marrow and other tissues to more than 3,000 in prefrontal cortex, thyroid, gluteal muscle and others. In addition, genes that were expressed most often tended to show more rhythmicity, or variability by time. Of the 25,000 genes in the primate genome, nearly 11,000 were expressed in all tissues. Of those (which mostly govern routine cellular functions, such as DNA repair and energy metabolism), 96.6 percent were particularly rhythmic in at least one tissue, varying drastically by when they were sampled.

Brief depression questionnaires could lead to unnecessary antidepressant prescriptions -- ScienceDaily

Of the 545 patients who did not complete brief depression questionnaires during their doctors' office visits, 10.5 percent were diagnosed with depression and 3.8 percent were prescribed antidepressants. Of the 50 patients who completed brief depression questionnaires during their doctors' office visits, 20 percent were diagnosed with depression and 12 percent were prescribed antidepressants.

Insomnia and depression: Japanese hospital workers questionnaire survey : Open Medicine

Chronic insomnia is the one of the factors influencing the development of mental illness. In this survey, we tried to clarify the relationship between chronic insomnia and various factors. Although there is no certainty about other possible independent variables, multiple regression analyses suggested that chronic insomnia is an important factor for depression. Koyama et al. found that subjects who suffered from severe sleeping disorders, not just during depression, tended to have decreased blood flow in the frontal lobe of the brain [2]. When SIGH-D was used to evaluate sleeping disorders, an IS of 3 or higher showed that its severity and the reduced blood flow in the frontal lobe are significantly correlated. Based on this biological finding, preliminary research was conducted with 108 working participants, which included healthy participants and patients with mild to moderate depressive episodes. The result showed that the IS was significantly correlated with the severity of depression, subjective fatigue, sadness, and suicidal thoughts. Thus, an IS evaluation has the possibility of identifying depression based on a questionnaire survey related to direct mood changes [3]. There have been robust findings concerning the biology underlying the close relationship between sleep disorders and depression. For example, Buckley has found that a protracted sleep disorder, not depression, induces hyperactivity of the HPA (hypothalamic-pituitary-adrenal axis) system [14]. Furthermore, exposure to extreme stress causes the excessive secretion of corticotropin releasing hormone (CRH) —a cerebral mechanism for stress adaptation. This release of CRH inhibits the activities of the serotonin pathway in the nervous system that extends from the dorsal raphe nucleus to the prefrontal area via the gamma-aminobutyric acid (GABA) system [15]. It is also known that CRH has a stimulant effect [14]. Therefore, it is inferred that a substantive lack of sleep will lead to a sustained activation of the HPA system once again, thus establishing a vicious cycle. On the other hand, the decline in frontal lobe function due to depression has been established by several earlier studies, including those that used functional brain imaging [15,16,17,18]. The protraction of a sleep disorder activating the HPA system and inhibiting the serotonin nervous system in the frontal lobe is believed to elicit a clinical condition similar to depression. Furthermore, the finding that the hyperactivity of the HPA system increases cortisol secretion, which inhibits the HPA system and damages hippocampal cells, further strengthens the suggested relationship between sleep disorders and depression. This biological finding strengthens the theory that a lack of sleep due to insomnia, exposure to stress, and overwork, leads to depression because of the accumulation of mental fatigue.

Clock protein controls daily cycle of gene expression by regulating chromosome loops: New understanding of Rev-erb's role has implications for metabolic disorders, cardiovascular disease, and cancer -- ScienceDaily

Human physiology works on a 24-hour cycle of gene expression (when the chromosome coding region is translated by RNA and then transcribed to make protein) and is controlled by the body's molecular clock. Core clock proteins activate or repress protein complexes that physically loop one part of a chromosome to become adjacent to a distant part of the same chromosome. The Penn team showed that daily oscillations of Rev-erb control gene expression in the mouse liver via interactions between on-and-off regions on the same chromosome. Previous work from the team demonstrated that by 5 p.m., Rev-erb increases to its highest concentration in mouse liver, where it turns off certain genes and therefore protein transcription. But as the day turns to night, its concentration steadily decreases and nearly vanishes from the liver by 5 a.m.

The happiness project | Science

In 2010, cancer biologist Lei Cao—inspired by a family member who had died of cancer—wondered whether she could combat it by looking beyond drugs or genes. Her team at OSU created a 1-square-meter enclosure filled with so many mazes, running wheels, and bright red, blue, and orange igloos that her daughter dubbed it “Disneyland for Mice.” <img class="fragment-image" src="https://d2ufo47lrtsv5s.cloudfront.net/content/sci/359/6376/624/F3.medium.gif"/> A fish at the University of Michigan in Ann Arbor gets to choose between an empty tank and one filled with marbles. PHOTO: AUSTIN THOMASON/MICHIGAN PHOTOGRAPHY When injected with cancer cells, animals housed there developed tumors 80% smaller than those in control mice, or no tumors at all. Cao even discovered a possible mechanism: A stimulating environment seemed to activate the brain's hypothalamus, which regulates hormones that affect everything from mood to cancer proliferation. “We showed that there's a hard science behind enrichment,” she says. “You can't just treat the body—you have to treat the mind.”

rat enrichment

Inspired by research that showed enrichment could spark the growth of new neurons, he provided the rodents with cardboard for making nests, brightly colored balls for play, and ladders and ropes to climb. Remarkably, the animals were much slower to develop symptoms of a Huntington-like disease than their counterparts in standard housing—the first demonstration that enrichment could significantly influence neurological disorders.

Piketty Thinks the EU Is Bad for Eastern Europe. He's Half Right. - Bloomberg

A billionaire owner of a private German company might stash them in an investment account in some offshore area or they could be reinvested in the Polish subsidiary that made them, pretty much from anywhere. What matters for a country is its ability to tax these profits adequately. In their race to be competitive foreign investment destinations, most eastern European countries don't overburden the corporations. And, given the prevalence of foreign companies -- as Piketty points out, they account for more than half of corporate assets in eastern Europe -- the foreigners end up contributing less to the construction of east European social safety nets and infrastructure than they do in their own countries. Instead, the local populations, who already earn less because relatively low wages are what attracts investment to the region, contribute more than people in wealthier countries in the form of consumption taxes.

The happiness project | Science

Today, lab mice live in shoebox-size cages hundreds of thousands of times smaller than their natural ranges, and rats can't forage or even stand upright. Both spend their days blasted by ventilation and bright fluorescent lighting that disrupts their day-night cycles. “We're doing the exact opposite of what we should be doing to make these animals happy,” Garner says. Lab animals tend to be obese, have weak immune systems, and develop cancer—all before scientists do any experiments on them.

On the Couch... with Dick Cavett | Psychology Today

I would spend days reading "The Variety of Religious Experiences" by William James from beginning to end - and not remembering at all what I read. Serani: Oh, I know what that's like. The cognitive fog and slowed thinking. Just terrible. Cavett:  Yeah, I would get three or four sentences into a paragraph and not get it. I'd try again and still couldn't get it. But making the effort to read was better than sitting in my apartment doing nothing or sleeping all day. One day, I'll have to give old William James another try again.

12 of 14

A large dose of intravenous methamphetamine hydrochloride reproduced the amphetamine psychosis in 12 of 14 patients dependent on amphetamine sulfate and failed to produce a psychosis in two patients who were eventually found to have not used amphetamine regularly above the therapeutic dose range. The psychosis was the facsimile of the disorder observed during drug abuse—a schizophrenic-like state of paranoia in a setting of clear consciousness accompanied by auditory or visual hallucinations, or both, but without thought disorder. Since in some cases the onset of the psychosis was sudden and occurred within one hour of commencing the intravenous injection, hypotheses about depletion of catecholamines and long term metabolites may need to be reconsidered.


Within a few days, P’s agitation lessened and he became happier, more affectionate, and more engaged in his schoolwork. Upon antibiotic discontinuance, his irritability returned, and resumption of treatment helped him regain control. After 6 weeks of treatment, repeat ASO was 791 with an anti-DNAase B titer of 1,090, i.e., basically unchanged. A Cunningham panel to check for evidence of immune dysfunction and antineural antibodies was unremarkable